Fusion event
HIV-chr15 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
26614461/26369314 (Hg38)
Nearest miRNA
hsa-mir-1268a/Upstream/520489; hsa-mir-10393/Downstream/2057177;
Upstream sequence
ACTTTATTTTTTCCCTTATTTGTCCTCTTATGAGACACTGATTGAAACCCAACTTTGAGCAGGAAACTAATACTAGAGAAAGAGAAATACCAAGATCTAG
Downstream sequence
Aatttactgactgttttgtgttagatccattctaaatgctctacatatatggtctcatttctcacatttcaaacctctgtgaatttctatttattattct
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.