Fusion event
HIV-PIK3R5 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
8809512/8906195 (Hg38)
Nearest miRNA
hsa-mir-1253/Upstream/719191; hsa-mir-10226/Downstream/3175704;
Upstream sequence
gtcatctaggttttaagccccacatgcattaggtatttgtcctaatgctctccctccccttgtcccccatccccgacaggccccggtgtgtgatgtcccc
Downstream sequence
tccctgtgtccatgtgttctcattgttcaaatcccacttatgagtgagaacatgcggtgtttggttttctgttcctgtgtCTGCGAAGCTATAAGCTGTG
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.