Fusion event
HIV-NF1 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
29574013/31246995 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-1180/Upstream/152570; hsa-mir-10226/Downstream/287888;
Nearest cancer related gene
Upstream sequence
ATAAGAGTTAGCAACACTGggccgggcacggtggctcatgaccgtaatcccagcactttgggaggctgaggtgggcagatcataaggtcaagagatctag
Downstream sequence
accatgccggccaacatggtgaaaccttgtctctactaaaaatacaaaaattacctgggcgtggtggtggtgcgcctgtagtcccatctacttgggaggc
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.