Fusion event
HIV-chr19 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
40461234/39955327 (Hg38)
Nearest miRNA
hsa-mir-10395/Upstream/125525; hsa-let-7e/Downstream/327216;
Upstream sequence
tgacttggactctcaaagtgctgggattataagtgtgagccacgtgcctggccccaaattgaatttagacactataatttgagcactaggggAGGAACTG
Downstream sequence
CCTTTAAtatttttaattttgtaaaacatttgcacagttccagagccaaaacttgacaataagttatcttcacagagctttagctgccatccctgtcctc
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.