Fusion event
HIV-FBXO7 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
32878021/32482034 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-1286/Upstream/860503; hsa-let-7a-3/Downstream/954548;
Upstream sequence
AATAGCTCAGAGAATGTCAGTGGTTCTTATGGAGTAGTAGTAAGGCTTGACAAGCCCAGCAGGGGATTTTGATATCTCCCTCTCATGTACTCAGCCTAGG
Downstream sequence
GTACCCTTTTTCATTTTTCCTCATATATTCTGTCCCACACAACTGCCAATAAGTAGTAAATGGCCAAAAGTTAGACATAGTGGTAAAGAAGCAAAACCTA
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.