Fusion event
HIV-chr3 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
133216813/133497969 (Hg38)
Nearest miRNA
hsa-let-7g/Upstream/1512038; hsa-mir-1224/Downstream/869835;
Upstream sequence
TTTTTTCTggctgggcgcgttggctcatgcctgtaatcccagcacttttggaggccaaggcgggtggatcaggagttcgagaccagcctggccaacatag
Downstream sequence
tgaaaccccatctctactaaaactacacaaaattagccgagtgtggtggtgggtgcctgtaatcccagttacttgggaggctgaggcaggagactcgctt
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.