Fusion event
HIV-chr6 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
95034037/94324319 (Hg38)
Nearest miRNA
hsa-mir-10398/Upstream/2802582; hsa-mir-1202/Downstream/3700212;
Upstream sequence
TAGAATTTTAGGGAATATACAACCCTTAAAAATCTACTCACATGTATAAATATCCTACTGGGTGGCAAACTTCAGGTTAAAAATTTTTATTTaagggata
Downstream sequence
cattaatatctccatttttcgtagaagaaaataaagttcagaaaggccaaataatttttccatggaaatcagctaagtagaagggtagaattcaaagcca
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.