Fusion event
HIV-chr7 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
24485920/24446301 (Hg38)
Nearest miRNA
hsa-mir-1183/Upstream/2975155; hsa-mir-10399/Downstream/1503618;
Upstream sequence
gcctcagcctcccgaagtgctgggattacaggtgtgagccactgcacctggccTAAAATATTaaaaaaaaaaaaaaaaaaaaaaaagaaGCCTAAGTATT
Downstream sequence
TCTGACTCTTCAATACTAGAACCTAGCAGCTAACCCAGGGAAGGCTACTCAACAAACAGCTATTGAACTAAAATCTTTCCACGTTTGTTCAATTGAAATG
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.