Fusion event
HIV-chr9 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
124099626/121337348 (Hg38)
Nearest miRNA
hsa-let-7a-1/Upstream/1092298; hsa-mir-12126/Downstream/782734;
Upstream sequence
ttccaacacattctcaaaaggtctgagacccaaaCAGCTGGACTAtaatctccctgttttacaggtgaggaaaatgaggctgagagaacatatgacttat
Downstream sequence
ccaaggtcacattataaagtggATGCTATAGCAAGGAAAGCACTCCAGAGCAGTGATTTTCAAACAGAAATATGTAGAATTCTATGAGGTGCTTCTGTGA
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.