Fusion event
HIV-DENND1A integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
126552120/123789841 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-let-7a-1/Upstream/304219; hsa-mir-12126/Downstream/902601;
Upstream sequence
tggtcatcattattcagtcacagatgtcaatctaacctcccttttttctcagtttctaaagcaGTGAGCCACAATAATTTGTGACAGATTCTTTTACTGT
Downstream sequence
AAGGTACAAAGAACACACAGAATAAAACATCTAGCAGCAGCAAGCGTCTCTGATCAATGTGCTGGTACATGGGAAATACACTATATGTAAAAACAAGCAC
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.