Fusion event
HIV-RERE integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
8780427/8720470 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-12136/Upstream/2290574; hsa-mir-101-1/Downstream/146032;
Nearest cancer related gene
Upstream sequence
caataaccaacagatttttttgtattctataaatttcacacaatattcaaaggcagtaagtgctaagaaaaaaaagtagagcaagaaggatTAAACATAT
Downstream sequence
GCAGAGGGTAGGTACCAGCTGgagagagaagagagacagacagacagagtcagagagagagcaagagagagagagagaacaagaacgagcaagagagagc
Target sequence
aacaataaccaacagatttttttgtattctataaatttcacacaatattcaaaggcagtaagtgctaagaaaaaaaagtagagcaagaaggatTAAACATAT
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.