Fusion event
HIV-MACF1 integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
39748288/39282517 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-12136/Upstream/1193188; hsa-mir-101-1/Downstream/1471838;
Upstream sequence
ATCTCTTGTTTGTAATTAGTTATAATACTGTTTCCATCTCCTCAATCAAAAATCAAAGCTTTGATTCATTTGTTCATTTGAAAAAGAAACATTTATTTAA
Downstream sequence
tgtatgccatcaagcagtggtaaatgcaatggcaggattagaaagtggcagaggtttgtggtactttggacagggtggtcagagatggcctttttggtga
Target sequence
CTacttttctaggaactgggtacaagtagcagtgaagaaaacagcgaaagttcttgctctcatggaacttatctttcagtagggagaataggtaataaa
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.