Fusion event
HIV-chr11 integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
95461209/95727780 (Hg38)
Nearest miRNA
hsa-mir-10392/Upstream/1261200; hsa-let-7a-2/Downstream/613658;
Upstream sequence
ACGATGAGATTGCTTCAATCCTGGGGAAAGCAGGGGGCAGGAGGCAGGAGGGAGCAAAGGCAAGAGCCCTGGGCAGCAGCATCTGCTTCTTTGGCACTGG
Downstream sequence
TGGAGTTCTCTGAGTATTGCCTCTTTACCATACTGTGTCATGGTACTTAATGGTAGGGAAGTTATTTTATGCATTTGTCTGCCCTTTCCTGAACACCTTC
Target sequence
GATATTTGGCAGTAGACCCTACCCTAGGCAGAAAAGCTGGGGCTGGAAAGAAGTAAAATGATAGTGTCTGGGGGCGGGGATGTTCTGGTGAAATACGCTGAGAATAACTCAGAAGTAATCCGTAAAGATTTTAAAGGAGTCTGGTGTGAACGAGGCAAAGCCAAAGGAATACCATATTTGGACTGCCATTCTGATGCTGTTGGCTTGGGAGACATGCTGTATATATCACTAGATATATGTGAATATCTTTCTATC
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.