Fusion event
HIV-CEP83 integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
94765067/94371475 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-let-7i/Upstream/7626326; hsa-mir-1178/Downstream/190314;
Upstream sequence
GCGCATGTGCACAAGTATTAGGTAGGGGATTGGGGGCAGGAACAAGTATAAATCATATAAATTCATTTTCCATAGCCCTTCTCTTTGGTAAGGAGCTTCT
Downstream sequence
AAAATTAGATATAGTCATATAATAAGGATTTAATCAATACAAACACAAAGGTTAGATTAACCCATTTTCTGATATATTATCCAAATATATAAAAGTATGG
Target sequence
AGAAATGAATAAACGGAGGGGGGAAGGAAGAATCAATTGAATCTGGTGACAAAATAGTGTAATGTGTATAGACTGTGTCTGTGTGCGCATGTGCACAAGTATTAGGTAGGGGATTGGGGGCAGGAACAAGTATAAATCATATAAATTCATTTTCCATAGCCCTTCTCTTTGGTAAGGAGCTTCT
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.