Fusion event
HIV-RSRC2 integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
122997861/122513482 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-let-7i/Upstream/1069130; hsa-mir-3612/Downstream/182425;
Upstream sequence
AAATTCTCCAGATTTCAAGGTAGTAAATAATCTCATATTCTGAAATTAAAGAACTACATTTAAAACTTTATCTGAAAGATCACCAAGTAATCTATATATC
Downstream sequence
AATGACATTTTGGATGCTATTAACGGCTTCACTTTTAAAAAAATCCAAAAACACAAACAGAATAGACTTATGGCATTCAAGTAAATAAGAGCTTAAAAAA
Target sequence
AATCCTGACCTTTAAGCCAAAAAAGAAACCAATATAAAAGGTCTATACATGGTAGTTTCTTAAGAAAAAAATTCTCCAGATTTCAAGGTAGTAAATAATCTCATATTCTGAAATTAAAGAACTACATTTAAAACTTTATCTGAAAGATCACCAAGTAATCTATATATC
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.