Fusion event
HIV-MRTFB integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
14305125/14211124 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-1225/Upstream/1490753; hsa-mir-11401/Downstream/92843;
Nearest cancer related gene
Upstream sequence
AACTTATTCAGTTTCAAAACACTAGAAAGAAATTACAGCATTAATTTATGCTTTCCAGTCTTCTGAATCATGGCTATGATAAACTGCTTTCTTGGTTTAT
Downstream sequence
CCACCACCACCACATCCCTGACTATGAACCAACTAATCAAAGAGGATCAAATTATGATATTTAAGACACCATTGCTAGGCCAGCTCTAATCTGCTTTCGG
Target sequence
GATATGGAATGATTTTTCTCTTTAGTAGATATTTTTCCCAGTAAAACCTTTTTTTTCTGGACTACTATTGAGAATCTAAATATTTTAAATCTAGCATTGTGATAGGCAAAAGGTGCTTTGATAATCTGCCAGATTTCTCCACCA
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.