Fusion event
HIV-MRTFB integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
14307494/14213813 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-1225/Upstream/1493442; hsa-mir-11401/Downstream/90154;
Nearest cancer related gene
Upstream sequence
TTTAACCCACAGCCTTACTTCCTCCAAACTGGATAGCAACATGAAGACCCAAAACTAAAACATGTTAGATACACAGGGAAGGTTTGATTCTTCACATAAC
Downstream sequence
CAATTAATGGACTAACACTTCCACACCAGCTGGTACCACAGATGCCTCTACCATACTGTTCCACTAAAAAAATTGGGGTCCAGAGGATTTCTTTATCAGT
Target sequence
TCTTAATCTGCTGTATTTTTTCAAGAAAAGAAGTGAGAATTTCCACCATTTCTGTTTATTCCCATTTTAATAACTTTTTAACCCACAGCCTTACTTCCTCCAAACTGGATAGCAACATGAAGACCCAAAACTAAAACATGTTAGATACACAGGGAAGGTTTGATTCTTCACATAAC
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.