Fusion event
HIV-MRTFB integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
14310089/14216348 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-1225/Upstream/1495977; hsa-mir-11401/Downstream/87619;
Nearest cancer related gene
Upstream sequence
agttcatcctaagccgacttatggggagtttcattgaaagaccttctactgTATAGCTTAAGAGGCAAGCAACTTTCAGCTTGGAATTTTGGGTAGACAC
Downstream sequence
CACATCATTATTTTTCATCATTTCTAAACATTTTTTAGAACAATGGAAAAAACATTAACAAGAGTTACCAGAAACACAAGTATGACAGAATAAAGCAGAT
Target sequence
cagactaaagaatatcagttcatcctaagccgacttatggggagtttcattgaaagaccttctactgTATAGCTTAAGAGGCAAGCAACTTTCAGCTTGGAATTTTGGGTAGACAC
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.