Fusion event
HIV-NF1 integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
29593569/31266617 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-1180/Upstream/172192; hsa-mir-10226/Downstream/268266;
Nearest cancer related gene
Upstream sequence
TAAATTGCCTAAGATCATTTTAATTTTCGTTTGCGTTTGAGATGAACCATATTTGTATTCTAACCCCAACCTTTAATACAACCAGGATATTTTTACTTTT
Downstream sequence
CCGTTGTTGTCTAAGTAAAAAGCAAACATTGGTAAGGGAGGTAGAAGATGTGTTTCCCCCTCTTCTTTAAAATCTTATTAGTTTACAAATAGCAAAGATT
Target sequence
GTTTGAGATGAACCATATTTGTATTCTAACCCCAACCTTTAATACAACCAGGATATTTTTACTTTT
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.