Fusion event
HIV-CCDC57 integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
80126890/82168960 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-10226/Upstream/475091; hsa-mir-4525/Downstream/67708;
Upstream sequence
agaatcgtgatttaaaaaataaagatctatattaaaacaggaatagaaagaaacttccttaacctccctccactacccccaccacaaaaaaccttcagca
Downstream sequence
gaaagacagctattatcaacatcataccggagagtttagctaggggcgataatgcaagaagaagtaaacaatatcagcattggaaaagaaaaataaaacC
Target sequence
aaaactcaacctaaaaaagtgaaatgctgaaagttcttcctctgggattaggga
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.