Fusion event
HIV-SUPT5H integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
39952678/39461922 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-10395/Upstream/52244; hsa-let-7e/Downstream/367794;
Upstream sequence
aaaaaaaaaaaaaaaaaataataataaTAATAATTAAAAGAAGTGTGCTCAAATCCTCCTACATGGTACCCTGGGGTAAAATTCTAGTTACTTCATTTGA
Downstream sequence
ctgggattataggcatccgccaccatgcccggctgatttttttgtatttttaatagagacggggtttcaccatgttggccagcctggtcttgaactcctg
Target sequence
GTTATGTCTCTGAttattatttttttttgagacggagtttcactcttgttgcccaggctggagtgcaatggtgtggtctcggctcactgcaacctctgcctcagcctcccgagtag
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.