Fusion event
HIV-HORMAD2 integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
30515092/30119419 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-1286/Upstream/112306; hsa-let-7a-3/Downstream/612138;
Upstream sequence
GCTCTGTCTAGCCATTAATTCAAAGTTTCTCAACTGCtatgcctagatagcgatcctttccacctcgatatagccagcctgtgcctagggtagataatac
Downstream sequence
ccttggactatttgcccgtatgcacaaatattctcatttgcttaccccagtatgtcatataaatatcatttccttgtgtccttgtatgaaaagattagaa
Target sequence
GCTTCTTGAGGCCAGAGAAAGGCCTTATACTTCTTTACACATTTCCCCACAAACCCTACAGAAAACCACTATTATAAAAAGGGGCTGCAACAATTGTTTACATTCCTGAAATCCATGGATTAAGCTGGTGGGAATAGAGAAAATGGCATGCAGCACAAAGGTAGAAATTATGTCAATAAGGTTGCCTACACGCTATTGATTGAATAACTCCATAAGGCTCTGTCTAGCCATTAATTCAAAGTTTCTCAACTGCta
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.