Fusion event
HIV-USP4 integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
49375392/49337722 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-12127/Upstream/63536; hsa-let-7g/Downstream/468415;
Nearest cancer related gene
Upstream sequence
ggctagctcttgctatgttgcccaggctggtcttgaactcctggcctcaagtgatcctcctgcctcagcttcccaaagtgctgggattacaggcatgagc
Downstream sequence
cgcttgaacccgggaggcagagattgcagtgagccgagatcgcgccactgcactccagcctggtgatgcagcgagacttcgtctcaaaaaaaaaaaaaaa
Target sequence
cactgcaccagaccTGTTTATATTTTTAAAGTATCACTGTGCTggccgggagcggtggctcacgcctgtaatcccagcactttgggaggctgagtcaggtggatcacgaggtcaggagatcgagaccatcctggccaacatggtgaaaccctgtctctactaaaaatacaaacattagcggggcatggtggtgcatgcctataatcccagctactcgggaggctgaagcaggagaat
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.