Fusion event
HIV-RBM15B integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
51434905/51397346 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-12127/Upstream/722183; hsa-let-7g/Downstream/870932;
Upstream sequence
ACAGGGTGGGGCGGGTGAGTGAAAAGGTGGAAATCCCTGGTACCTTGCCTGGTGGTTACACAGTTTAACCATAGGCCAATTTTAGGGGCCTCTGAAGTAT
Downstream sequence
CTCCTTAGCTTTGCCAACTCCATCCTCCAAAACTTCCCAGAATACCTCCCTTTCCAGTTCTACCAAATCTGTACTTGGGAGCAGCCTGCTGGATCCAGAA
Target sequence
CTTTCTACAAACGCAGACAAGCTCCACTACCCCTAACCTGCCAGGATGCTCAAGTCCACTGTCACAATCCCTTTCAGAAAACATTAGTGGCCGCTGCCCCAGCTACAGAGACGGCCGAAATGCTTTCA
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.