Fusion event
HIV-chr6 integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
26126840/26126370 (Hg38)
Nearest miRNA
hsa-mir-3691/Upstream/7554490; hsa-mir-10398/Downstream/1021256;
Upstream sequence
ACTTCCCAGATACTGACACCGGCTCAGGGCGGATCCAGCCTTTTCCGCTCTTCCCTCCCTCCACCCCCTCCTTTCCCTACAACTACTCTCAAAGGAAAAG
Downstream sequence
CTTATGGGCCTTGGAATCCTTTTTATTCACTGACCAAATTGCCTTTGATTCCAGCTCCCAATCGGTGTGTGACCTTGGCCTAGGGCTTAATCTCTTCCTA
Target sequence
GGTTGGATGTCCCATTTGGGTGAAAACAAAGTGGCATAAAAGCAAATGATCACCTTTGATAGCCACATATTAGAATTTTCCGAGGGTATTTTTAAATTACAACGATTCTAATGGGCAGCTGGGCTGAGAATCATCAGATTTGAAGGTCTGGTTTCACATGGCTCTTGGGCTGAGAAGACCGGATTTTCCCCCCCCAGCATTTCCTGTATGTCCGAGAATTTCGATCCTAAGGTTAGAATTGC
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.