Fusion event
HIV-MIOS integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
7635841/7596061 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-339/Upstream/529016; hsa-mir-10399/Downstream/10531159;
Upstream sequence
CAGTGTGAATTCTGAAGTCATTGTTATTTCTAAAATGTTGGAGTCTAAAGTTTGAGTTCTTCCACCAATTTCAGTGGTATTAGTAAGAATATAATTAAAA
Downstream sequence
ATTATGGTTTGCATTACATTTATTTTTTCTTTCATTTGTTTTGTAGGTTTTTGTGAGTTGCAATTTCTGTGGCAAGTCAATCTCCTACAGCTGTTCAGCT
Target sequence
AGGAAGTACCCCAAAAATGTAATTGCTAGGTATAAATTTTAAATGAAAGCTAGTCAACCTTAGCAGATCAATTTTGaaatataaaataaagttttttaaaagtatttaaaaataatttGTTAGGCGCACACTAAGTTATTTAGCATTCC
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.