Fusion event
HIV-chrX integration
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
13041109/13022913 (Hg38)
Nearest miRNA
hsa-mir-3690-1/Upstream/1704227; hsa-let-7f-2/Downstream/567379;
Upstream sequence
GTGATCCAAGGGAGAAGATTCTTAAATTATGTTCAATTGAATGTACACATCCAAACGTGGCTTAGCTTCTTTATGTCTTATGCTGTAAGAGTCTTTTTAT
Downstream sequence
ATCCTGGGGTAGGGGGGTGAGTGGGAGGGAAGTCTCTTTAAGGTCAAATTGAGTTACTGTCTCTTGCAGATGAAGATGAATATGCTCTCTCTCACCAGAC
Target sequence
GATTTGTTTTGATTTTTATGTTTTTTAAATTTTTCTAGGATATGTGCTTGATAGTACTGAAACAAAGGCAGAAAAGA
Maldarelli, F., et al. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells. Science,2014, 345(6193): 179-183.