Fusion event
EBV-chr18 integration
Disease
Nasopharyngeal carcinoma (NPC)
Quality evaluation
Normal
Integrated sequence
TGATCAAAATTATAATTATAAGCATGAGAGCAAAGGAATAGAGGACAAGGAGGGCTCCTCCAGTCCAGTCACTCATAACGATGTACAGCCAAAACAGTAG| |CGCCAAGAGGAGGAGAAGGAGAGCAAGGCCTAGGGAAGAGGAGAGGGGGGGTCCTCGAGGGGGCCGTCGCGGGCCCGGTGGGCCCCTCTCAAGGTCGTGT
End
25215165/27635201 (Hg38)
Nearest miRNA
hsa-mir-1-2/Upstream/1043666; hsa-mir-122/Downstream/2663709;
Upstream sequence
GTTTTTCTTCACTGCAACTGTGGGGTATCAGTTGCTGTGGTCCTTATCCAGAAGGCAGAAGGAAGAAAATGGCACCAGGGCTTTTAAATTGCAAACAGAG
Downstream sequence
ctatcctcagcaaactaacacaggaacagaaaacaaaatactgcatgttctcacttataagtgggagctaaatgataagaacttattaactacaaagaag
Takakuwa, T., et al. Identification of Epstein-Barr virus integrated sites in lymphoblastoid cell line (IB4). Virus Res,2005, 108(1-2): 133-138.