Fusion event
EBV-CSMD3 integration
Disease
Nasopharyngeal carcinoma (NPC)
Quality evaluation
Normal
Integrated sequence
ACACGGCCTGGCGTGCAAAGATGGACATCTCTGGCTCGAAAGACTCGGAGTAGCCGTCCAGGTCCTGCAGAAAATTCAGCGAGATGGTCTCCACCAGGGA| |CCGGAAGGGCTCAGAGTGCCCGTCGCAGTAGAGGAGGGGAGCAACGACCCTGACCTGTCCCAGGGTCTTCAGGTTAAACAGATATTGAGAGGAGACAAAG
End
113566829/112554600 (Hg38)
Nearest miRNA
hsa-mir-12123/Upstream/8070135; hsa-mir-10400/Downstream/88893;
Upstream sequence
tataggtttagcacaattcctacaaaaagctcatcaggaatttttctgcatagagataagattattctaaaatttacatgaaatgcataggatctaatat
Downstream sequence
AACATAGCTGTTTCCCCCCATATTTCTTTGTTATAAAATATTACCTGGCATTTTTGACCTCAAATGAGCCAGTGTCATATGCTGTAGTACTGGAGTTCAT
Takakuwa, T., et al. Identification of Epstein-Barr virus integrated sites in lymphoblastoid cell line (IB4). Virus Res,2005, 108(1-2): 133-138.