Fusion event
EBV-chr4:q13.1 integration
Detection method
GenCap Enrichment+NGS
Disease
Gastric carcinoma (GC)
Quality evaluation
Normal
Integrated sequence
CCGTGTGAGAACAAGAGTAAAGCTGTGGAACAGATAAAAAATGCCTTTAACAAGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTT| |TTATTAACTACATAGAAGCATACATGACAATTAAAGCCAGGTGATAATTCCATACCCTGGAAGCAGGAGATGGGTGCATTTCACCCCAACCCCCCCTTTC
End
61390319/60524601 (Hg38)
Nearest miRNA
hsa-mir-12113/Upstream/7811854; hsa-mir-1243/Downstream/398018;
Upstream sequence
AAGTGTTTAGGGTGGGTAACATTTTTTTTGAAGGGTGTATATGCCTATTTTGGCCTTAAGGTATTTAGATCTCAGACATAGTGAAGACCATAGAAGACTA
Downstream sequence
TTTATTTATGTATGCATTTACTCATTTAGTAGTTCATTGCAGTTTTACTATCAGTACTGAAATGTAGTTTTAACCCAAATATGAGTATTCTAAAGATTTT
Cao, S., et al.High-throughput RNA sequencing-based virome analysis of 50 lymphoma cell lines from the Cancer Cell Line Encyclopedia project. J Virol,2015, 89(1): 713-729.