Fusion event
EBV-PLPP4 integration
Detection method
GenCap Enrichment+NGS
Disease
Gastric carcinoma (GC)
Quality evaluation
Normal
Integrated sequence
ACAGTGCTTACTGCGGTTGTCACTTGTGAGTACACACGCACCATTTACAATGCATGATGTTCGTGAGATTGATCTGTCTCTAACAGTTCACTTCCTCTGC| |TTTTCTCCTCAGTCTTTGCAATTTGCCTAACATGGAGGATTGAGGACCCACCTTTTAATTCTCTTCTGTTTGCATTGCTGGCCGCAGCTGGCGGACTACA
End
122262578/120503066 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-107/Upstream/544474; hsa-mir-202/Downstream/1913899;
Upstream sequence
CTCTTATTTCTAGAAGCTTCTACTGTGAGACTAAGAAATGTGATTATGTAGAGAATGACTAGTAAATAATTCTTAGTTTTTTTTTAATTGAGCTGAGAGC
Downstream sequence
AAATAAAACACAAATGAGTTTTTTTTAATGGAACTGATGTTTGCTTTTAGGTTGAAACTTCCTAGCTCATCAAATACAACACAATCCCAATGGGAGAGAT
Cao, S., et al.High-throughput RNA sequencing-based virome analysis of 50 lymphoma cell lines from the Cancer Cell Line Encyclopedia project. J Virol,2015, 89(1): 713-729.