Fusion event
EBV-chr20:p12.1 integration
Detection method
GenCap Enrichment+NGS
Disease
Gastric carcinoma (GC)
Quality evaluation
Normal
Integrated sequence
GATTGGTGGCATTTTCTGAGCCACCAAATGCACCTCGAGGTTGGTAGACAGCCTTCGTATGGGGTGTCAGCTGGCCAAAGTCAAGATCAAGTTGATGCTT| |TTTGCCCCCGACATCGAAATTGATAGTTACATTGACATCTGCCGTGCAAACATTGCATGTGGGGTAAAATGGGAATTCCGGAATCTCAACATTGAAAAAA
End
16238415/16257770 (Hg38)
Nearest miRNA
hsa-mir-103a-2/Upstream/5608075; hsa-mir-1-1/Downstream/2212845;
Upstream sequence
catTCTACCAATGCTAAcatcatcaccatcaccatcatcatcatcactaccaccaccagcatctccattatcaacactgccgccatcagcatcacctcca
Downstream sequence
AAAACACACACACTCCTTCCCCATCCCAAAGAGACACACCCCTTCCCCATCCCAAAGAGACACACCCCTTCCCCATCCCAAAGAGACACACCCCTTCCCC
Cao, S., et al.High-throughput RNA sequencing-based virome analysis of 50 lymphoma cell lines from the Cancer Cell Line Encyclopedia project. J Virol,2015, 89(1): 713-729.