Fusion event
EBV-chr3:q25.1 integration
Detection method
GenCap Enrichment+NGS
Disease
Gastric carcinoma (GC)
Quality evaluation
Normal
Integrated sequence
ATTATAGCTCTGGCACTGCTAGCGTCACTGATTTTGGGCACACTTAACTTGACTACAATGTTCCTTCTCATGCTCCTATGGACACTTGGTAAGTTTTCCC| |TTCCTTTAACTCATTACTTGTTCTTTTGTAATCGCAGCTCTAACTTGGCATCTCTTTTACAGTGGTTCTCCTGATTTGCTCTTCGTGCTCTTCATGTCCA
End
150059994/150342207 (Hg38)
Nearest miRNA
hsa-let-7g/Upstream/15904301; hsa-mir-1224/Downstream/1223669;
Upstream sequence
ctagtctactactaccatcaaacacctccattgaatttctcagttcagttatagcattcttcagatctttaatttctgtttagcacttttttatactttc
Downstream sequence
TAAAGGAAGTGGATTTGACTTGGTGAAAATATGGTTATACAGCATATGATCACAAGTACTTTTTTAAACACCCTGAAAGAAAATATAGAGAAGTACACTC
Cao, S., et al.High-throughput RNA sequencing-based virome analysis of 50 lymphoma cell lines from the Cancer Cell Line Encyclopedia project. J Virol,2015, 89(1): 713-729.