Fusion event
EBV-chr7:q31.2 integration
Detection method
GenCap Enrichment+NGS
Disease
Gastric carcinoma (GC)
Quality evaluation
Normal
Integrated sequence
TAACACACATTTTACGCTTTGTTCCTTAGATTTGTTCTGCATGTTATTACTGATTGTCGCTGGCATACTCTTCATTCTTGCTATCCTGACCGAATGGGGC| |AGTGGAAATAGAACATACGGTCCAGTTTTTATGTGCCTCGGTGGCCTGCTCACCATGGTAGCCGGCGCTGTGTGGCTGACGGTGATGTCTAACACGCTTT
End
117321530/117681476 (Hg38)
Nearest miRNA
hsa-mir-10525/Upstream/661157; hsa-mir-10399/Downstream/9376612;
Upstream sequence
GCAAAGCAGAAAGAGGGCGGTCAGCGAAGAGCGGCTGCGGCTTGGGGCTAGCGTCCCAGCGCCCCGGGGACCAGGGTTAGGTGACCCCGAACCGTCCCTA
Downstream sequence
gaagtggaggcaccgtggaggagaagaggctgttggactgagaggtcatggtattggaggagttatttacattgatattaaaatctctaagagtgatggc
Cao, S., et al.High-throughput RNA sequencing-based virome analysis of 50 lymphoma cell lines from the Cancer Cell Line Encyclopedia project. J Virol,2015, 89(1): 713-729.