Fusion event
EBV-chr9:q21.31 integration
Detection method
GenCap Enrichment+NGS
Disease
Gastric carcinoma (GC)
Quality evaluation
Normal
Integrated sequence
TTTCACCACCTGTTGGGTGAGCGGAGGTTAGTAAAGGCATATGTGACGTTGAATTGTCACTGGTGGAGGGGCTGAGTGTCTCTGGGTTTGAACTGGGTCT| |CAGTGACATGGAAGAGGTTGAACTTGAAGTTATGTTATGTTGGCCTGTGGTAACAGCACTGGTTGCATTTTTTGGTTGGCTGGTAACTACTGGGGTGGGA
End
81414602/78799686 (Hg38)
Nearest miRNA
hsa-mir-101-2/Upstream/7989602; hsa-let-7a-1/Downstream/5170062;
Upstream sequence
GAATAATTAAGAATTCAGCTTCAGTCCAGAGCAGCTTATGCATCTGCCTACAGGCACTCAGCCCAAACCTTGATATAAGAATGGAACATACTACCACACA
Downstream sequence
ggtttcctggaagcaaggaggaattaagaatctattatagcaatctacatgagaaatgatggtaactggtccaaaacaatagcaatgggaatggacagaa
Cao, S., et al.High-throughput RNA sequencing-based virome analysis of 50 lymphoma cell lines from the Cancer Cell Line Encyclopedia project. J Virol,2015, 89(1): 713-729.