Fusion event
MCV-chr8 integration
Detection method
PCR and Sanger sequencing
Disease
Merkel cell carcinoma (MCC)
End
65566806/64493851 (Hg38)
Nearest CpG islands
None/Target, None/Upstream, None/Downstream
Upstream sequence
accatggcacgtgtatacctatgtaacaaaactgcatattctgcacatgtaccccagaacttaaagtttaataaaaaaaaaagaactgaaaaaagaaata
Downstream sequence
agtgaatgtgaaatgaagaaagcaatacaaaagatcaatgaaaaaaaaaggtggtttttgaaaagataaaattgacaaacctttagccagactaagaaaa
Target sequence
gacatttatgacaaacccacagccaatatcataccgagtgggcaaaaactggaagcactccctataaaaaccagcacaagacaaggataccctctctcaccacttttattcaacatagtattggaagttctggccagggcaatcaggcaagagaaagaaataaagggtattcaaataggaaaagagaaagtcaaattgtctctatttgcagatgacatgattgtatatttggaaaactccattgtctcagcccaa
Duncavage, E. J., et al. Hybrid capture and next-generation sequencing identify viral integration sites from formalin-fixed, paraffin-embedded tissue. J Mol Diagn,2011,13(3): 325-333.