Fusion event
HTLV-1-C12orf56 integration
Data source
download(RID)
Disease
Adult T-cell leukemia (ATL)
Quality evaluation
Normal
Reference genome
Not given
End
64744977/64351197 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-let-7i/Upstream/527470; hsa-mir-1178/Downstream/271312;
Upstream sequence
atattctagttctgagaaactatcccacacatcctgccatttgggaaaataaggccaagggagttaaccaaagccaagccccatgcacccaaatcttagc
Downstream sequence
aagcataaatatagccaccactcatctgggcatgtcacaagacatccttttctctcacttgttagaggaggactcaattccacagttacaccttagcaat
Cook, L. B., et al. The role of HTLV-1 clonality, proviral structure, and genomic integration site in adult T-cell leukemia/lymphoma. Blood,2014, 123(25): 3925-3931.