Fusion event
HTLV-1-COL22A1 integration
Data source
download(RID)
Disease
HTLV-1 associated myelopathy/tropical spastic paraparesis (HAM/TSP)
Quality evaluation
Normal
Reference genome
Not given
End
139659050/138646807 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-1204/Upstream/3841862; hsa-mir-10400/Downstream/2085757;
Upstream sequence
AAGAAAACAAGAATGAGTATCAGGCCCACATCCAGGGTCATCACCATGCCATCAGCCTCGTACCTCCCTTCACTGATTTTCCACTGGGACTTCCGTCAGC
Downstream sequence
TACCCCTGCCCCTAGCCTGTCTGAGCAAAGGGTATAGGCAAGTGGTAGTACTGAGTGTGGCTGTGCAACCATGGCATGACCCACCATTAATATGGTTAGT
Furuta, R., et al.Human T-cell leukemia virus type 1 infects multiple lineage hematopoietic cells in vivo. PLoS Pathog,2017,13(11): e1006722.