Fusion event
HTLV-1-LINC00339 integration
Data source
download(RID)
Disease
HTLV-1 associated myelopathy/tropical spastic paraparesis (HAM/TSP)
Quality evaluation
Normal
Reference genome
Not given
End
22352789/22026296 (Hg38)
Location type
ncRNA_intronic
Nearest miRNA
hsa-mir-12136/Upstream/1037864; hsa-mir-101-1/Downstream/239943;
Upstream sequence
ACGGAGGAGGATCTGTGTATAACGTTCGGCACAATGTTAGATAGGAAGTAAGGGCGCAGTGCACTGGAGttattttttcttttttttttttttgagacgg
Downstream sequence
agtctcgctctgtcgcccaggccggagttgcagtgccgcgttgtcgcctcactgcaaccttctctgccacatgggttcaagcgattctcctgcctcagcc
Furuta, R., et al.Human T-cell leukemia virus type 1 infects multiple lineage hematopoietic cells in vivo. PLoS Pathog,2017,13(11): e1006722.