Fusion event
HTLV-1-LINC00871 integration
Data source
download(RID)
Disease
HTLV-1 associated myelopathy/tropical spastic paraparesis (HAM/TSP)
Quality evaluation
Normal
Reference genome
Not given
End
46739932/46270729 (Hg38)
Location type
ncRNA_intronic
Nearest miRNA
hsa-mir-208a/Upstream/9318338; hsa-mir-1185-1/Downstream/1490266;
Upstream sequence
caatgccacaaggtgcattttaatcttcttttattctacttggaactccttcctcaagtaaaaagtaacatatagccccatttacccacaatctatttgc
Downstream sequence
tATTGGATTGATGCCCTCTTTGTTTATACTATCTCCCATTTTCATTGCTACAATTCTGTCTGCTCAGCTACTTCTTTACCCTACTTGGGCTCCAATAACC
Furuta, R., et al.Human T-cell leukemia virus type 1 infects multiple lineage hematopoietic cells in vivo. PLoS Pathog,2017,13(11): e1006722.