Basic Information
VIS ID
TVIS44024415
Fusion event
HTLV-1-ADCY10 integration
Validated
No
Detection method
HTS
Data source
download(RID)
Sample type
Nontumor
Disease
Not given
Quality evaluation
Normal
Reported year
2017
PubMed ID
29186194
Virus Sequence
Virus name
HTLV-1
Reference genome
Not given
Host Sequence
Chromosome
chr1
Cytoband
q24.2
Reference genome
GRCh37/hg19
Start
167778580/167809343 (Hg38)
End
167778580/167809343 (Hg38)
Orient
-
Location type
Intronic
Target gene
ADCY10
Nearest miRNA
hsa-mir-101-1/Upstream/1654545; hsa-mir-1182/Downstream/189317;
Nearest TSS
ENST00000473358/Upstream/22276; ENST00000451545/Downstream/11063;
Nearest CpG islands
None/Target, chr1-CpG: 111/Upstream/86728, chr1-CpG: 28/Downstream/10815
Nearby gene
ADCY10(-45) ;
Upstream sequence
TTGTAGACCATGACAAATGTTTGCTATTTGTAATATTGTGCTACCTCCAAAAGACTTAACAATTGGACATTTAAAAATAAGTATTTTCAGTTAACATACT
Downstream sequence
AACTAGAAACATGTCTTTTGCAACACACGATGTCATACCATCTTGAGATTAATAATTTGTAATATGATACAGTTTTGCATGGGCTGAAATAAACAGGTCA
Reference
Furuta, R., et al.Human T-cell leukemia virus type 1 infects multiple lineage hematopoietic cells in vivo. PLoS Pathog,2017,13(11): e1006722.
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