Basic Information
VIS ID
TVIS44028084
Fusion event
HTLV-1-ANOS1 integration
Validated
No
Detection method
HTS
Data source
download(RID)
Sample type
Nontumor
Disease
Not given
Quality evaluation
Normal
Reported year
2017
PubMed ID
29186194
Virus Sequence
Virus name
HTLV-1
Reference genome
Not given
Host Sequence
Chromosome
chrX
Cytoband
p22.31
Reference genome
GRCh37/hg19
Start
8698459/8730418 (Hg38)
End
8698459/8730418 (Hg38)
Orient
+
Location type
Intronic
Target gene
ANOS1
Nearest miRNA
hsa-mir-3690-1/Upstream/603357; hsa-let-7f-2/Downstream/2588196;
Nearest TSS
ENST00000429181/Upstream/159768; ENST00000432442/Downstream/1768;
Nearest CpG islands
None/Target, chrX-CpG: 62/Upstream/802851, chrX-CpG: 144/Downstream/398
Upstream sequence
TGGGTAATTTCACCACAGGAGGTGAGCACTGGGTCTTCCATTCCCTGAAGACGCAGAAGGACTACAGAGCGTGCCCATTTCTCTGACACCCACGAGACGC
Downstream sequence
TGCTTCTACGACTTAGAACAAACTCAACTGCACACTCGCGAACGCGCCAGCTTCACCAGCCGGTTCAAGATCATCCCCGAGGGTAAGGGGAATCACTTCC
Reference
Furuta, R., et al.Human T-cell leukemia virus type 1 infects multiple lineage hematopoietic cells in vivo. PLoS Pathog,2017,13(11): e1006722.
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