Basic Information
VIS ID
TVIS44030448
Fusion event
HTLV-1-ANO1 integration
Validated
No
Detection method
HTS
Data source
Curated
Sample type
Disease
Not given
Quality evaluation
Normal
Reported year
2019
PubMed ID
Virus Sequence
Virus name
HTLV-1
Subtype
HTLV-1c
Reference genome
Host Sequence
Chromosome
chr11
Cytoband
q13.3
Reference genome
End
69670707/70146953 (Hg38)
Orient
+
Location type
Intronic
Fragile sites / regions
Target gene
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-10392/Upstream/1063695; hsa-let-7a-2/Downstream/137002;
Upstream sequence
agactcagcaagtgtgctcttccaccttcccctgcctgctttttctagccacactggcagcagaggggatggtgcccacccagatgaagggtgggtctgc
Downstream sequence
ctctccccctccactgactcaaatgttaatctcctgtagcaacaccttcacagacacacccagaaacaacactttgcatccttcaatccaatcaagttga
Reference
Turpin, J., et al. Impact of Hepatitis B Virus Coinfection on Human T-Lymphotropic Virus Type 1 Clonality in an Indigenous Population of Central Australia. J Infect Dis ,2019,219(4): 562-567.
Curate