Proximate region of VIS (GRCh38)VISEnhancerEnhancer/PromoterPromoterGene126421926126438598127253294126837610
Basic Information
VIS ID
TVIS44032666
Fusion event
HTLV-1-GRM8 integration
Validated
No
Detection method
HTS
Data source
Curated
Sample type
Disease
Not given
Quality evaluation
Normal
Reported year
2019
PubMed ID
Virus Sequence
Virus name
HTLV-1
Subtype
HTLV-1c
Reference genome
Host Sequence
Chromosome
chr7
Cytoband
q31.33
Reference genome
End
126264900/126837610 (Hg38)
Orient
-
Location type
Intronic
Target gene
Nearest miRNA
hsa-mir-10525/Upstream/9817291; hsa-mir-10399/Downstream/220478;
Upstream sequence
TGTCTAAGTTATTTTTCCAAGAGTGGAAATTCATTCATGTTGATACACGCAATTCTCACTTCATTCCCTCTTCCAATGACAAGGTGAGGAGATCTATGTC
Downstream sequence
TAGAGCACTTTTTATCTAAGTGAAAGGAGCCAACAAGTGCCAGATGAACATGACTGTGGTCTCATCTTTTTTCACCTTAACCCACTGGCCTAACGGGCCT
Reference
Turpin, J., et al. Impact of Hepatitis B Virus Coinfection on Human T-Lymphotropic Virus Type 1 Clonality in an Indigenous Population of Central Australia. J Infect Dis ,2019,219(4): 562-567.
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