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VISDB
Viral Integration Site DataBase
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TVIS45000012
Basic Information
VIS ID
TVIS45000012
Fusion event
XMRV-chr1 integration
Validated
Yes
Detection method
Linker ligation-mediated PCR
Data source
Curated
Sample type
Cell line
Disease
Prostate cancer (PC)
Quality evaluation
Normal
Reported year
2010
PubMed ID
20421928
Virus Sequence
Virus name
XMRV
Reference genome
Not given
Host Sequence
Chromosome
chr1
Reference genome
NCBI36/hg18
Start
9804426
End
(Hg38)
Orient
+
Nearest CpG islands
None/Target, None/Upstream, None/Downstream
Reference
Kim, S., et al. Integration site preference of xenotropic murine leukemia virus-related virus, a new human retrovirus associated with prostate cancer.J Virol ,2008,82(20): 9964-9977.
Sample Information
×
Sample name
C-8
Sample type
Cell line
Gender
Female
CpG Island Information
×
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