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Curation
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Oncogene
Tumor suppressor gene
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Host2Virus
Virus2Host
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Host2Host
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Virus2Host
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VISDB
Viral Integration Site DataBase
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My curation
TVIS10000153
Basic Information
VIS ID
TVIS10000153
Fusion name
HBV-KLHL32 integration
State
Validated
Fusion type
Deatction Method
invPCR
Curated Way
Curated
Sample
Cell line
Disease
Hepatocellular carcinoma
Quality evaluation
Perfect
Reported year
2018
Pubmed ID
29437961
Virus Sequence
Virus name
Subtype
Reference genome
U95551.1
Edit
Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
CTTGAGGCATACTTCAAAGACTGTTTGTTTAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGATTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAAT| |TGGTCTGCGCACCAGCACCATGCAACTTTTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTT
Host Sequence
Chromosome
Cytoband
Reference genome
GRCh38.p7
Edit
Start
End
Orient
Location type
Target gene
KLHL32
Target sequence
Junction sequence
TAAATATATTCTCCCATTATGGACAGCAACTCTTTGTACTAGGAGGCTGTAGGCATAAAT
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
Junction sequence preview
TAAATATATTCTCCCATTATGGACAGCAACTCTTTGTACTAGGAGGCTGTAGGCATAAAT
* Color:
Human Sequence
/
Virus Sequence
/
Overlapped sequence
/
Unknown sequence
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