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Curation
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Oncogene
Tumor suppressor gene
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ncRNA
Host2Host
Host2Virus
Virus2Host
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Host2Host
Host2Virus
Virus2Host
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Host2Host
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Virus2Host
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VISDB
Viral Integration Site DataBase
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My curation
TVIS10000358
Basic Information
VIS ID
TVIS10000358
Fusion name
HBV-MYO3B integration
State
Validated
Fusion type
Deatction Method
invPCR+NAH
Curated Way
Curated
Sample
Cell line
Disease
Hepatocellular carcinoma
Quality evaluation
Good
Reported year
2017
Pubmed ID
28414318
Virus Sequence
Virus name
Subtype
Reference genome
X70185.1
Edit
Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
GATCCTGCCCAAGGTCTTACATAAGAGGACTCTTGGACTCTCAGCAATGTCAACGACCGACCTTGAGGCCTACTTCAAAGACTGT
Host Sequence
Chromosome
Cytoband
Reference genome
GRCh37/hg19
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Start
End
Orient
Location type
Fragile sites / regions
FRA2G
Target gene
MYO3B
Target sequence
AAGAGCTGGCTTCAGGTATTCCAGGGACTAAAATCATGTAACCTGTATCTTCTGTCTCCTGCTGTCCCCTGCAAGCCTAGAGTCTCTCCTCTCCTCATCTCTCATCTCCGCTCTCTTCTCCCTAGCTTCGCCATGCACTGACGATACTTTTTTTTAACTTCGTACAGCCTTCCTCTACTTGGCCATGG
Junction sequence
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
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