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Curation
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Tumor suppressor gene
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Virus2Host
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VISDB
Viral Integration Site DataBase
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My curation
TVIS10000433
Basic Information
VIS ID
TVIS10000433
Fusion name
HBV-RPS28 integration
State
Validated
Fusion type
Deatction Method
PCR and Sanger sequencing
Curated Way
Curated
Sample
Tumor
Disease
Hepatocellular carcinoma
Quality evaluation
Perfect
Reported year
2015
Pubmed ID
25901726
Virus Sequence
Virus name
Subtype
Reference genome
Not given
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Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
Host Sequence
Chromosome
Cytoband
Reference genome
GRCh37/hg19
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Start
End
Orient
Location type
Fragile sites / regions
FRA19B
Target gene
RPS28
Target sequence
Junction sequence
CTGGGCAGGACCGGTTCTCAGGGACAGTGCacagcctcctagtacaaagatcattaacct
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
Junction sequence preview
CTGGGCAGGACCGGTTCTCAGGGACAGTGCacagcctcctagtacaaagatcattaacct
* Color:
Human Sequence
/
Virus Sequence
/
Overlapped sequence
/
Unknown sequence
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