VISDB - VIS Curation

Basic Information

VIS ID

TVIS10005416

Fusion name

HBV-chr5 integration

State

Not Validated

Fusion type

Deatction Method

PCR and Ultra-deep sequencing

Curated Way

Curated

Sample

Nontumor

Disease

Hepatocellular carcinoma

Quality evaluation

Normal

Reported year

2018

Pubmed ID

Virus Sequence

Virus name

Subtype

Reference genome

Strand

Gene

Region type

Start

End

Orient

Integrated Sequence

Host Sequence

Chromosome

Cytoband

Reference genome

GRCh37/hg19 Edit

Start

End

Orient

Location type

Nearby gene

RN7SKP64(-328) ; PAIP2(+8139) ;

Nearest cancer gene

PAIP2(TSG, +8139) ;

Target sequence

Junction sequence

iHostLeftEnd

iHostRightBegin

iVirusLeft

iVirusRight

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