VISDB - VIS Curation

Basic Information

VIS ID

TVIS10006099

Fusion name

HBV-chr11 integration

State

Not Validated

Fusion type

Deatction Method

PCR and Ultra-deep sequencing

Curated Way

Curated

Sample

Tumor

Disease

Hepatocellular carcinoma

Quality evaluation

Normal

Reported year

2018

Pubmed ID

Virus Sequence

Virus name

Subtype

Reference genome

Strand

Gene

Region type

Start

End

Orient

Integrated Sequence

Host Sequence

Chromosome

Cytoband

Reference genome

GRCh37/hg19 Edit

Start

End

Orient

Location type

Fragile sites / regions

Nearby gene

MAP4K2(-129) ; MEN1(+131) ;

Nearest cancer gene

MEN1(TSG, +131) ;

Target sequence

Junction sequence

iHostLeftEnd

iHostRightBegin

iVirusLeft

iVirusRight

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